General structure of cryptophanes: syn and anti diastereomeric forms

Cryptophanes are a class of organic supramolecular compounds studied and synthesized primarily for molecular encapsulation and recognition. One possible noteworthy application of cryptophanes is encapsulation and storage of hydrogen gas for potential use in fuel cell automobiles. Cryptophanes can also serve as containers in which organic chemists can carry out reactions that would otherwise be difficult to run under normal conditions. Due to their unique molecular recognition properties, cryptophanes also hold great promise as a potentially new way to study the binding of organic molecules with substrates, particularly as pertaining to biological and biochemical applications.[1]

Discovery

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Cryptophanes were discovered by Andrรฉ Collet and Jacqueline Gabard in 1981[2] when these researchers created, using template-directed synthesis, the first cryptophane, now known as cryptophane-A.

Structure

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Cryptophane cages are formed by two cup-shaped [1.1.1]โ€“orthocyclophane units (see cyclotriveratrylene),[3] connected by three bridges (denoted Y). There are also choices of the peripheral substitutes R1 and R2 attached to the aromatic rings of the units. Most cryptophanes exhibit two diastereomeric forms (syn and anti), distinguished by their symmetry type. This general scheme offers a variety of choices (Y, R1, R2, and symmetry type) by which the shape, volume and chemical properties of the generally hydrophobic pocket inside the cage can be modified, making cryptophanes suitable for encapsulating many types of small molecules and even chemical reactions.

General classification

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Depending on their structure, cryptophane cages are classified according to the following table.[3]

Classification of known cryptophane structures
StructureName
Bridges YR1R2ย antiย ย synย described in
3 ร— O(CX2)2O, where X is H or DOCX3OCX3ABrotin et al.[4]
3 ร— O(CX2)2OOCH2CO2HOCH2CO2HA3
3 ร— O(CX2)2OOCH3HCD
3 ร— O(CH2)3OOCH3OCH3EF
3 ร— O(CH2)3OOCH2CO2HOCH2CO2HE3
3 ร— O(CH2)5OOCH3OCH3OP
3 ร— O(CH2)5OOCH2CO2HOCH2CO2HO3
3 ร— OCH2Cโ‰กCCโ‰กCH2OCH3CH3ฮณ (gamma)ฮด (delta)
2 ร— O(CH2)2O, 1 ร— O(CH2)3OOCH3OCH3223
2 ร— O(CH2)3O, 1 ร— O(CH2)2OOCH3OCH3233
2 ร— O(CH2)2O, 1 ร— O(CH2)4OOCH3OCH3224

References

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  1. ^ Palaniappan, K. K.; Francis, M. B.; Pines, A.; Wemmer, D. E. Molecular sensing using hyperpolarized xenon NMR spectroscopy. Isr. J. Chem. 2014, 54, 104โˆ’112.
  2. ^ Gabard, J.; Collet, A. (1981). "Synthesis of a (D3)-bis(cyclotriveratrylenyl) macrocage by stereospecific replication of a (C3)-subunit". Journal of the Chemical Society, Chemical Communications (21). Royal Society of Chemistry: 1137โ€“1139. doi:10.1039/C39810001137.
  3. ^ a b Holman, K. Travis (2004). "Cryptophanes: Molecular Containers". In Atwood, J. L.; Steed, J. W. (eds.). Encyclopedia of Supramolecular Chemistry. CRC Press. pp.ย 340โ€“348. doi:10.1081/E-ESMC (inactive 11 July 2025). ISBNย 0-8247-4723-2.{{cite book}}: CS1 maint: DOI inactive as of July 2025 (link)
  4. ^ Brotin, Thierry; Devic, Thomas; Lesage, Anne; Emsley, Lyndon; Collet, Andrรฉ (March 2001). "Synthesis of deuterium-labeled cryptophane-A and investigation of Xe@Cryptophane complexation dynamics by 1D-EXSY NMR experiments". Chemistry: A European Journal. 7 (7): 1561โ€“1573. doi:10.1002/1521-3765(20010401)7:7<1561::AID-CHEM1561>3.0.CO;2-9. PMIDย 11330913.

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Bromochlorofluoromethane

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Cyclotriveratrylene

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Cryptand

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Macromolecular cages

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Hyperpolarization (physics)

at 0.0ppm.[citation needed] When 129Xe incorporated and bind with the Cryptophane-A molecule, then the chemical shift value in NMR acquisition shifted